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naei  (New England Biolabs)


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    Structured Review

    New England Biolabs naei
    Naei, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 95/100, based on 134 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/naei/NaeI/pm42813690-325-17-20
    Average 95 stars, based on 134 article reviews
    naei - by Bioz Stars, 2026-11
    95/100 stars

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    Related Articles

    Genomic Sequencing:

    Article Title: Identification of evolutionary conserved and diverged regulatory elements of embryonic Msx1 expression among amniote species via 3D-genome analyses and in vivo assays.
    Article Snippet: The Msx1 gene encodes a homeobox transcription factor that regulates numerous patterning events during the development of organs such as the limb bud and jaw primordium.. In craniofacial development, Msx1 is involved not only in the proximal–distal patterning of the jaw but also in the spatial arrangement of different tooth types along the proximal-distal axis in various mammalian species.. Our previous study demonstrated that speciesspecific differences in Msx1 expression within the jaw primordium contribute to the establishment of distinct dental formulas.

    De-Phosphorylation Assay:

    Article Title: Mechanisms of HIV Latency in Hematopoietic Progenitors: GFI1 as a Key Regulator
    Article Snippet: The sequence of the synthesized hU6-MCS gBlocks DNA fragment (IDT) (XbaI-hU6-MCS-PmeI, 296 bp) is: AAATCTAGAGAGGGCCTATTTCCCATGATTCCTTCATATTTGCATATACGATACAAGGC TGTTAGAGAGATAATTGGAATTAATTTGACTGTAAACACAAAGATATTAGTACAAAATA CGTGACGTAGAAAGTAATAATTTCTTGGGTAGTTTGCAGTTTTAAAATTATGTTTTAAA ATGGACTATCATATGCTTACCGTAACTTGAAAGTATTTCGATTTCTTGGCTTTATATATCT TGTGGAAAGGACGAAACACCGGTCCGCAGGTATGCACGCGTGTTAACGTTTAAACAA A Oligonucleotide sequences used for shRNA constructs: shRNA-74, ATTCCCTCCGTTTAGAGAATG; shRNA-978, ACTGTCCACACACCTGCTTAT; shRNA-1052, AGAAGTCAGACATGAAGAAAC; shRNA-1060, GACATGAAGAAACACACTTTC; shRNA-1247, AGACGCAGCATGGGCTCAAAT; shRNA-1834, AGGTGGACAAATGCTAATATT. .. pNL4-3 ΔGPE-GFP (McNamara et al., 2012 ) was digested with XhoI (NEB cat# R0146) and NaeI (NEB cat# R0190), followed by dephosphorylation and gel purification. .. A synthetic 2939 bp gene fragment (Genscript GenTitan) containing 15 bp of overlap with the digested vector, a constitutive spleen focus-forming virus promoter (pSFFV) with Kozak sequence driving mCherry, and a 3’LTR bearing a mutated polyA signal and SV40 polyA signal was generated.

    Gel Purification:

    Article Title: Mechanisms of HIV Latency in Hematopoietic Progenitors: GFI1 as a Key Regulator
    Article Snippet: The sequence of the synthesized hU6-MCS gBlocks DNA fragment (IDT) (XbaI-hU6-MCS-PmeI, 296 bp) is: AAATCTAGAGAGGGCCTATTTCCCATGATTCCTTCATATTTGCATATACGATACAAGGC TGTTAGAGAGATAATTGGAATTAATTTGACTGTAAACACAAAGATATTAGTACAAAATA CGTGACGTAGAAAGTAATAATTTCTTGGGTAGTTTGCAGTTTTAAAATTATGTTTTAAA ATGGACTATCATATGCTTACCGTAACTTGAAAGTATTTCGATTTCTTGGCTTTATATATCT TGTGGAAAGGACGAAACACCGGTCCGCAGGTATGCACGCGTGTTAACGTTTAAACAA A Oligonucleotide sequences used for shRNA constructs: shRNA-74, ATTCCCTCCGTTTAGAGAATG; shRNA-978, ACTGTCCACACACCTGCTTAT; shRNA-1052, AGAAGTCAGACATGAAGAAAC; shRNA-1060, GACATGAAGAAACACACTTTC; shRNA-1247, AGACGCAGCATGGGCTCAAAT; shRNA-1834, AGGTGGACAAATGCTAATATT. .. pNL4-3 ΔGPE-GFP (McNamara et al., 2012 ) was digested with XhoI (NEB cat# R0146) and NaeI (NEB cat# R0190), followed by dephosphorylation and gel purification. .. A synthetic 2939 bp gene fragment (Genscript GenTitan) containing 15 bp of overlap with the digested vector, a constitutive spleen focus-forming virus promoter (pSFFV) with Kozak sequence driving mCherry, and a 3’LTR bearing a mutated polyA signal and SV40 polyA signal was generated.

    Sequencing:

    Article Title: Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
    Article Snippet: M13mp2 DNA was isolated from E. coli strain MC1061 by Qiagen Miniprep. .. To allow for greater sequencing depth at a defined region of the M13mp2 genome, an 840-bp fragment was enriched by complete digestion with the restriction enzymes Bsu36I and NaeI (New England Biolabs), followed by isolation of the fragment on an agarose gel by the Recochip system (Takara Bio). ..

    Isolation:

    Article Title: Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
    Article Snippet: M13mp2 DNA was isolated from E. coli strain MC1061 by Qiagen Miniprep. .. To allow for greater sequencing depth at a defined region of the M13mp2 genome, an 840-bp fragment was enriched by complete digestion with the restriction enzymes Bsu36I and NaeI (New England Biolabs), followed by isolation of the fragment on an agarose gel by the Recochip system (Takara Bio). ..

    Article Title: Ribosomal Incorporation of Thioxanthone as a Noncanonical Amino Acid Facilitates the Engineering of Photoenzymes
    Article Snippet: .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified. .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified.

    Agarose Gel Electrophoresis:

    Article Title: Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
    Article Snippet: M13mp2 DNA was isolated from E. coli strain MC1061 by Qiagen Miniprep. .. To allow for greater sequencing depth at a defined region of the M13mp2 genome, an 840-bp fragment was enriched by complete digestion with the restriction enzymes Bsu36I and NaeI (New England Biolabs), followed by isolation of the fragment on an agarose gel by the Recochip system (Takara Bio). ..

    Plasmid Preparation:

    Article Title: Ribosomal Incorporation of Thioxanthone as a Noncanonical Amino Acid Facilitates the Engineering of Photoenzymes
    Article Snippet: .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified. .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified.

    Purification:

    Article Title: Ribosomal Incorporation of Thioxanthone as a Noncanonical Amino Acid Facilitates the Engineering of Photoenzymes
    Article Snippet: .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified. .. To remove the sfGFP_S2TAG reporter plasmid, the isolated plasmids were digested with NaeI (NEB) and subsequently purified.

    Generated:

    Article Title: The H19/miR-760/BST2 regulatory axis sustains breast cancer tumorigenesis and metastasis.
    Article Snippet: For the construction of the miRNA reporter, a fragment of BST2 (415 bp) and a fragment of H19 (451 bp), both containing the seed sequence ofmiR-760, were each cloned in a pMIRREPORT Firefly luciferase vector (Ambion, #AM5795). .. Both fragments were generated by PCR (primers are listed in supplemental data, Table S1) and cloned between NaeI and PmeI (New England Biolabs, #R0190 and #R0560). ..

    Polymerase Chain Reaction:

    Article Title: The H19/miR-760/BST2 regulatory axis sustains breast cancer tumorigenesis and metastasis.
    Article Snippet: For the construction of the miRNA reporter, a fragment of BST2 (415 bp) and a fragment of H19 (451 bp), both containing the seed sequence ofmiR-760, were each cloned in a pMIRREPORT Firefly luciferase vector (Ambion, #AM5795). .. Both fragments were generated by PCR (primers are listed in supplemental data, Table S1) and cloned between NaeI and PmeI (New England Biolabs, #R0190 and #R0560). ..

    Clone Assay:

    Article Title: The H19/miR-760/BST2 regulatory axis sustains breast cancer tumorigenesis and metastasis.
    Article Snippet: For the construction of the miRNA reporter, a fragment of BST2 (415 bp) and a fragment of H19 (451 bp), both containing the seed sequence ofmiR-760, were each cloned in a pMIRREPORT Firefly luciferase vector (Ambion, #AM5795). .. Both fragments were generated by PCR (primers are listed in supplemental data, Table S1) and cloned between NaeI and PmeI (New England Biolabs, #R0190 and #R0560). ..

    other:

    Article Title: Integrating natural and engineered genetic variations to decode regulatory influence on blood traits
    Article Snippet: NaeI , New England Biolabs , Cat#R0190S.



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